Materials Map

Discover the materials research landscape. Find experts, partners, networks.

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The Materials Map is an open tool for improving networking and interdisciplinary exchange within materials research. It enables cross-database search for cooperation and network partners and discovering of the research landscape.

The dashboard provides detailed information about the selected scientist, e.g. publications. The dashboard can be filtered and shows the relationship to co-authors in different diagrams. In addition, a link is provided to find contact information.

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Materials Map under construction

The Materials Map is still under development. In its current state, it is only based on one single data source and, thus, incomplete and contains duplicates. We are working on incorporating new open data sources like ORCID to improve the quality and the timeliness of our data. We will update Materials Map as soon as possible and kindly ask for your patience.

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1.080 Topics available

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977 Locations available

693.932 PEOPLE
693.932 People People

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Show results for 693.932 people that are selected by your search filters.

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Naji, M.
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in Cooperation with on an Cooperation-Score of 37%

Topics

Publications (12/12 displayed)

  • 2023Surface properties influence marine biofilm rheology, with implications for ship drag7citations
  • 2019Biofilm mechanics: Implications in infection and survival.154citations
  • 2018Viscoelastic properties of Pseudomonas aeruginosa variant biofilms.78citations
  • 2017A marine biofilm flow-cell for screening antifouling marine coatings using optical coherence tomographycitations
  • 2016Development of X-ray micro-focus computed tomography to image and quantify biofilms in central venous catheter models in vitro6citations
  • 2015Helicobacter pylori ATCC 43629/NCTC 11639 Outer Membrane Vesicles (OMVs) from biofilm and planktonic phase associated with extracellular DNA (eDNA)122citations
  • 2011Advances in biofilm mechanicscitations
  • 2010Designing biomimetic antifouling surfaces189citations
  • 2008Impact of nitrate on bacterial structure and function in injection-water biofilms.96citations
  • 2005Viscoelasticity of staphylococcus aureus biofilms in response to fluid shear allows resistance to detachment and facilitates rolling migrationcitations
  • 2004Rheology of biofilms formed from the dental plaque pathogen Streptococcus mutans89citations
  • 2003Viscoelastic properties of a mixed culture biofilm from rheometer creep analysis123citations

Places of action

Chart of shared publication
Longyear, Jennifer E.
1 / 1 shared
Snowdon, Alexandra A.
1 / 2 shared
Wharton, Julian A.
2 / 27 shared
Dennington, Simon P.
1 / 1 shared
Fabbri, S.
1 / 1 shared
Es, Gloag
2 / 2 shared
Dj, Wozniak
2 / 2 shared
German, Guy K.
1 / 1 shared
Dennington, Simon
1 / 1 shared
Fabbri, Stefania
1 / 1 shared
Longyear, Jennifer, Elise
1 / 1 shared
Clarke, Professor Stuart
1 / 1 shared
Thurner, Philipp J.
1 / 5 shared
Bull, Daniel
1 / 4 shared
Faust, Saul
1 / 2 shared
Calton, Elizabeth
1 / 1 shared
Johnston, David
1 / 2 shared
Jones, Gareth L.
1 / 1 shared
Howlin, Robert
1 / 1 shared
Niehaus, Wilmari
1 / 1 shared
Mavrogordato, Mark
1 / 8 shared
Muraro, Raffaella
1 / 1 shared
Pompilio, Arianna
1 / 2 shared
Mincione, Gabriella
1 / 1 shared
Marzio, Luisa Di
1 / 1 shared
Paolino, Donatella
1 / 1 shared
Celia, Christian
1 / 2 shared
Hall-Stoodley, Luanne
1 / 1 shared
Codagnone, Marilina
1 / 1 shared
Grande, Rossella
1 / 1 shared
Marcantonio, Maria C. Di
1 / 1 shared
Robuffo, Iole
1 / 1 shared
Guélon, Thomas
1 / 1 shared
Mathias, Jean-Dennis
1 / 1 shared
Stokes, K. R.
1 / 12 shared
Werwinski, S.
1 / 1 shared
Goodes, L. R.
1 / 2 shared
Wood, Robert J. K.
1 / 93 shared
Salta, M.
1 / 5 shared
Dennington, S. P.
1 / 2 shared
Ferdelman, Timothy G.
1 / 1 shared
Abed, Raeid M. M.
1 / 1 shared
Dunsmore, Braden
1 / 1 shared
Gieseke, Armin
1 / 1 shared
Beer, Dirk De
1 / 1 shared
Schwermer, Carsten U.
1 / 1 shared
Lavik, Gaute
1 / 1 shared
Rupp, Cory J.
2 / 2 shared
Fux, Christoph A.
1 / 1 shared
Vinogradov, A. M.
1 / 1 shared
Winston, M.
1 / 1 shared
Rupp, C. J.
1 / 1 shared
Cunningham, Al B.
1 / 1 shared
Towler, Brett W.
1 / 1 shared
Chart of publication period
2023
2019
2018
2017
2016
2015
2011
2010
2008
2005
2004
2003

Co-Authors (by relevance)

  • Longyear, Jennifer E.
  • Snowdon, Alexandra A.
  • Wharton, Julian A.
  • Dennington, Simon P.
  • Fabbri, S.
  • Es, Gloag
  • Dj, Wozniak
  • German, Guy K.
  • Dennington, Simon
  • Fabbri, Stefania
  • Longyear, Jennifer, Elise
  • Clarke, Professor Stuart
  • Thurner, Philipp J.
  • Bull, Daniel
  • Faust, Saul
  • Calton, Elizabeth
  • Johnston, David
  • Jones, Gareth L.
  • Howlin, Robert
  • Niehaus, Wilmari
  • Mavrogordato, Mark
  • Muraro, Raffaella
  • Pompilio, Arianna
  • Mincione, Gabriella
  • Marzio, Luisa Di
  • Paolino, Donatella
  • Celia, Christian
  • Hall-Stoodley, Luanne
  • Codagnone, Marilina
  • Grande, Rossella
  • Marcantonio, Maria C. Di
  • Robuffo, Iole
  • Guélon, Thomas
  • Mathias, Jean-Dennis
  • Stokes, K. R.
  • Werwinski, S.
  • Goodes, L. R.
  • Wood, Robert J. K.
  • Salta, M.
  • Dennington, S. P.
  • Ferdelman, Timothy G.
  • Abed, Raeid M. M.
  • Dunsmore, Braden
  • Gieseke, Armin
  • Beer, Dirk De
  • Schwermer, Carsten U.
  • Lavik, Gaute
  • Rupp, Cory J.
  • Fux, Christoph A.
  • Vinogradov, A. M.
  • Winston, M.
  • Rupp, C. J.
  • Cunningham, Al B.
  • Towler, Brett W.
OrganizationsLocationPeople

article

Helicobacter pylori ATCC 43629/NCTC 11639 Outer Membrane Vesicles (OMVs) from biofilm and planktonic phase associated with extracellular DNA (eDNA)

  • Muraro, Raffaella
  • Pompilio, Arianna
  • Mincione, Gabriella
  • Stoodley, Paul
  • Marzio, Luisa Di
  • Paolino, Donatella
  • Celia, Christian
  • Hall-Stoodley, Luanne
  • Codagnone, Marilina
  • Grande, Rossella
  • Marcantonio, Maria C. Di
  • Robuffo, Iole
Abstract

Helicobacter pylori persistence is associated with its capacity to develop biofilms as a response to changing environmental conditions and stress. Extracellular DNA (eDNA) is a component of H. pylori biofilm matrix but the lack of DNase I activity supports the hypothesis that eDNA might be protected by other extracellular polymeric substances (EPS) and/or Outer Membrane Vesicles (OMVs), which bleb from the bacteria surface during growth. The aim of the present study was to both identify the eDNA presence on OMVs segregated from H. pylori ATCC 43629/NCTC 11639 biofilm (bOMVs) and its planktonic phase (pOMVs) and to characterize the physical-chemical properties of the OMVs. The presence of eDNA in bOMVs and pOMVs was initially carried out using DNase I-gold complex labeling and Transmission Electron Microscope analysis (TEM). bOMVs and pOMVs were further isolated and physical-chemical characterization carried out using dynamic light scattering (DLS) analysis. eDNA associated with OMVs was detected and quantified using a PicoGreen spectrophotometer assay, while its extraction was performed with a DNA Kit. TEM images showed that eDNA was mainly associated with the OMV membrane surfaces; while PicoGreen staining showed a four-fold increase of dsDNA in bOMVs compared with pOMVs. The eDNA extracted from OMVs was visualized using gel electrophoresis. DLS analysis indicated that both planktonic and biofilm H. pylori phenotypes generated vesicles, with a broad distribution of sizes on the nanometer scale. The DLS aggregation assay suggested that eDNA may play a role in the aggregation of OMVs, in the biofilm phenotype. Moreover, the eDNA associated with vesicle membrane may impede DNase I activity on H. pylori biofilms. These results suggest that OMVs derived from the H. pylori biofilm phenotype may play a structural role by preventing eDNA degradation by nucleases, providing a bridging function between eDNA strands on OMV surfaces and promoting aggregation.

Topics
  • impedance spectroscopy
  • surface
  • phase
  • extraction
  • gold
  • transmission electron microscopy
  • dynamic light scattering