Materials Map

Discover the materials research landscape. Find experts, partners, networks.

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The Materials Map is an open tool for improving networking and interdisciplinary exchange within materials research. It enables cross-database search for cooperation and network partners and discovering of the research landscape.

The dashboard provides detailed information about the selected scientist, e.g. publications. The dashboard can be filtered and shows the relationship to co-authors in different diagrams. In addition, a link is provided to find contact information.

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The Materials Map is still under development. In its current state, it is only based on one single data source and, thus, incomplete and contains duplicates. We are working on incorporating new open data sources like ORCID to improve the quality and the timeliness of our data. We will update Materials Map as soon as possible and kindly ask for your patience.

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in Cooperation with on an Cooperation-Score of 37%

Topics

Publications (1/1 displayed)

  • 2023How do engineered Yarrowia lipolytica strains secrete free fatty acids: hints from comparative transcriptomics4citations

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Van Nieuwerburgh, Filip
1 / 2 shared
Adiutama, Michelle Patricia
1 / 1 shared
Vidal, Lea
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Bogaert, Inge Noëlle Adrienne Van
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Deforce, Dieter
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Nicaud, Jean-Marc
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2023

Co-Authors (by relevance)

  • Van Nieuwerburgh, Filip
  • Adiutama, Michelle Patricia
  • Vidal, Lea
  • Bogaert, Inge Noëlle Adrienne Van
  • Deforce, Dieter
  • Nicaud, Jean-Marc
OrganizationsLocationPeople

article

How do engineered Yarrowia lipolytica strains secrete free fatty acids: hints from comparative transcriptomics

  • Van Nieuwerburgh, Filip
  • Adiutama, Michelle Patricia
  • Vidal, Lea
  • Salvador López, José Manuel
  • Bogaert, Inge Noëlle Adrienne Van
  • Deforce, Dieter
  • Nicaud, Jean-Marc
Abstract

<jats:title>Abstract</jats:title><jats:p>Yarrowia lipolytica has been considered one of the most promising platforms for the microbial production of fatty acids and derived products. The deletion of the faa1 gene coding for an acyl-CoA synthetase leads to the accumulation and secretion of free fatty acids (FFAs) into the extracellular space. The secretion of products is beneficial for the development of microbial cell factories to avoid intracellular inhibitory effects and reduce downstream processing costs. However, the mechanism behind the secretion of fatty acids is not well known. As a starting point, we compared the transcriptome of this mutant showing FFA secretion to a wildtype-like strain not showing this phenotype. The 12 most upregulated genes were evaluated for involvement in FFA secretion by the creation of deletion and overexpression mutants, among them MCH2, YMOH, three cell wall proteins CWP3, CWP4 and CWP11, M12B, and three proteins with unknown functions YUP1, YUP2, and YUP3. None of these proteins take a clear or isolated role in FFA export. As the transcriptomic data revealed an overrepresentation of cell wall-related proteins, some of them were further examined on a theoretical and experimental way. Surprisingly, overexpression of Ygpi led to the production of FFAs in the wildtype-like genetic background. Finally, some of the evaluated genes showed involvement in resistance to FFA toxicity.</jats:p>

Topics
  • impedance spectroscopy
  • toxicity