Materials Map

Discover the materials research landscape. Find experts, partners, networks.

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The Materials Map is an open tool for improving networking and interdisciplinary exchange within materials research. It enables cross-database search for cooperation and network partners and discovering of the research landscape.

The dashboard provides detailed information about the selected scientist, e.g. publications. The dashboard can be filtered and shows the relationship to co-authors in different diagrams. In addition, a link is provided to find contact information.

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Materials Map under construction

The Materials Map is still under development. In its current state, it is only based on one single data source and, thus, incomplete and contains duplicates. We are working on incorporating new open data sources like ORCID to improve the quality and the timeliness of our data. We will update Materials Map as soon as possible and kindly ask for your patience.

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in Cooperation with on an Cooperation-Score of 37%

Topics

Publications (2/2 displayed)

  • 2016High surface area graphene foams by chemical vapor depositioncitations
  • 2013GRN2SBML: automated encoding and annotation of inferred gene regulatory networks complying with SBML4citations

Places of action

Chart of shared publication
Drieschner, Simon
1 / 12 shared
Makrygiannis, Evangelos
1 / 1 shared
Blaschke, Benno M.
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Wohlketzetter, Jãrg
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Garrido, Jose
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Vieten, Josua
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Hoffmann, Bianca
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Dräger, Andreas
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Kupfer, Peter
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Vlaic, Sebastian
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Chart of publication period
2016
2013

Co-Authors (by relevance)

  • Drieschner, Simon
  • Makrygiannis, Evangelos
  • Blaschke, Benno M.
  • Wohlketzetter, Jãrg
  • Garrido, Jose
  • Bonaccorso, Francesco
  • Vieten, Josua
  • Colombo, Luigi
  • Morandi, Vittorio
  • Hoffmann, Bianca
  • Dräger, Andreas
  • Kupfer, Peter
  • Vlaic, Sebastian
OrganizationsLocationPeople

article

GRN2SBML: automated encoding and annotation of inferred gene regulatory networks complying with SBML

  • Hoffmann, Bianca
  • Dräger, Andreas
  • Kupfer, Peter
  • Vlaic, Sebastian
  • Weber, Michael
Abstract

<jats:title>Abstract</jats:title><jats:p>Summary: GRN2SBML automatically encodes gene regulatory networks derived from several inference tools in systems biology markup language. Providing a graphical user interface, the networks can be annotated via the simple object access protocol (SOAP)-based application programming interface of BioMart Central Portal and minimum information required in the annotation of models registry. Additionally, we provide an R-package, which processes the output of supported inference algorithms and automatically passes all required parameters to GRN2SBML. Therefore, GRN2SBML closes a gap in the processing pipeline between the inference of gene regulatory networks and their subsequent analysis, visualization and storage.</jats:p><jats:p>Availability: GRN2SBML is freely available under the GNU Public License version 3 and can be downloaded from http://www.hki-jena.de/index.php/0/2/490.</jats:p><jats:p>Supplementary information: General information on GRN2SBML, examples and tutorials are available at the tool’s web page.</jats:p><jats:p>Contact:  Sebastian.Vlaic@hki-jena.de or andraeger@eng.ucsd.edu</jats:p>

Topics
  • impedance spectroscopy